{"id":4112,"date":"2023-05-25T20:20:05","date_gmt":"2023-05-25T20:20:05","guid":{"rendered":"http:\/\/www.geneethic.com.tr\/?page_id=4112"},"modified":"2024-11-12T12:02:12","modified_gmt":"2024-11-12T12:02:12","slug":"untargeted-metabolomics","status":"publish","type":"page","link":"https:\/\/www.geneethic.com.tr\/?page_id=4112","title":{"rendered":"Untargeted Metabolomics"},"content":{"rendered":"[vc_row et_full_width=&#8221;true&#8221; et_row_padding=&#8221;true&#8221; css=&#8221;.vc_custom_1579113527778{padding-top: 120px !important;padding-bottom: 60px !important;background-color: #f6f6f6 !important;}&#8221;][vc_column css=&#8221;.vc_custom_1684760689814{background-color: #f6f6f6 !important;}&#8221;][vc_row_inner][vc_column_inner animation=&#8221;animation bottom-to-top&#8221;]\t<div id=\"et-image-656\" class=\"et-image aligncenter full   et_image_link\">\n\t\t<div class=\"et-image-inner animation bottom-to-top\">\n\t\t\t\t\t\t\t<div class=\"et-image-thumb \">\n\t\t\t\t\t<img loading=\"lazy\" decoding=\"async\" width=\"150\" height=\"150\" src=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/09\/dddddremoved-background-150x150.png\" class=\"attachment-thumbnail\" alt=\"\" \/>\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t\t\t\t<\/div>\n\t<\/div>\n  [vc_column_text css=&#8221;.vc_custom_1730534583870{margin-bottom: 0px !important;}&#8221;]\n<h3 class=\"2xl:text-4xl xl:text-3xl lg:text-2xl md:text-2xl text-3xl leading-relaxed sm:font-normal font-semibold text-black sm:mb-10 mb-6 mt-0 text-pre-wrap\">Service Description<\/h3>\n<div class=\"text-base text-blank mb-7 text-pre-wrap !leading-loose\">The metabolome refers to the collection of all small molecule metabolites (&lt; 1500 Da) in cells, tissues, organs or biological organisms, metabolites produced by microorganisms, and all exogenous substances from heterologous organisms.<br \/>\nMetabolomics is a research method comprising qualitative and quantitative analysis of all metabolites in an organism. It involves the comparison of the metabolome between control and test groups (for example, a specific gene mutation or environmental change), screening of differential metabolites by statistical analysis, and metabolic pathway analysis of differential metabolites, to identify differences between metabolites and physiological\/pathological changes.<br \/>\nUntargeted Metabolomics is an important branch of metabolomics and designed to obtain a metabolite profile and screen for differentially-expressed molecules in the sample. In turn, untargeted medical metabolomics is an important branch of untargeted metabolomics. As many metabolites from different cell samples, microbial samples, animal samples or clinical samples as possible are measured and compared between control and test groups without bias.<br \/>\nBGI has extensive experience in the field of untargeted medical metabolomics with well-developed reliable workflows using market leading technologies and a bioinformatics infrastructure that is second to none.<\/div>\n[\/vc_column_text][\/vc_column_inner][\/vc_row_inner][\/vc_column][\/vc_row][vc_row et_full_width=&#8221;true&#8221; et_row_padding=&#8221;true&#8221; css=&#8221;.vc_custom_1579113590633{padding-top: 60px !important;background-color: #f6f6f6 !important;}&#8221;][vc_column][vc_row_inner et_column_align=&#8221;align-center&#8221; content_placement=&#8221;middle&#8221;][vc_column_inner width=&#8221;1\/2&#8243; animation=&#8221;animation bottom-to-top&#8221; offset=&#8221;vc_col-lg-6&#8243;][vc_column_text css=&#8221;.vc_custom_1730534632022{margin-bottom: 0px !important;}&#8221;]\n<h3 class=\"2xl:text-4xl xl:text-3xl lg:text-2xl md:text-2xl text-3xl leading-relaxed sm:font-normal font-semibold text-black sm:mb-10 mb-6 mt-0 text-pre-wrap\">Mass Spectrometry Service Specification<\/h3>\n<div class=\"text-base text-blank mb-7 text-pre-wrap !leading-loose\">Untargeted Metabolomics services are performed using Waters ACQUITY UPLC and cutting-edge mass spectrometer (Q Exactive HF\/HF-X and Q-TOF 5600).<\/div>\n<div class=\"flex justify-center items-center w-[160px] flex-shrink-0 relative sm:mb-0 mb-10 \"><img decoding=\"async\" class=\"max-w-[120px]\" src=\"https:\/\/cdn.it.bgi.com\/source\/list1_13.png\" alt=\"\" \/><\/div>\n<div class=\"flex-1\">\n<h4 class=\"text-lg text-[#3ba792] mb-4\">Sample Preparation and Services<\/h4>\n<div>\n<div class=\"style_seve_content__QlWY2\">\n<p>Increase metabolome depth of coverage using both ACQUITY UPLC BEH C18 and Amide column<\/p>\n<p>(+) and (-) ESI detection by a Q\u00a0Exactive HF\/HF-X mass spectrometer<\/p>\n<\/div>\n<\/div>\n<\/div>\n<div class=\"flex justify-center items-center w-[160px] flex-shrink-0 relative sm:mb-0 mb-10 \"><img decoding=\"async\" class=\"max-w-[120px]\" src=\"https:\/\/cdn.it.bgi.com\/source\/list2_28.png\" alt=\"\" \/><\/div>\n<div class=\"flex-1\">\n<h4 class=\"text-lg text-[#3ba792] mb-4\">Quality Standard<\/h4>\n<div>\n<div class=\"style_seve_content__QlWY2\">\n<p>Summary includes all methods and data analysis<\/p>\n<p>Reports provided in Excel or PDF format, RAW files available upon request<\/p>\n<\/div>\n<\/div>\n<\/div>\n<div class=\"flex justify-center items-center w-[160px] flex-shrink-0 relative sm:mb-0 mb-10 \"><img decoding=\"async\" class=\"max-w-[120px]\" src=\"https:\/\/cdn.it.bgi.com\/source\/list3_9.png\" alt=\"\" \/><\/div>\n<div class=\"flex-1\">\n<h4 class=\"text-lg text-[#3ba792] mb-4\">Turn Around Time<\/h4>\n<div>\n<div class=\"style_seve_content__QlWY2\">\n<p>Typical 5-7 weeks after sample receipt for raw data delivery<\/p>\n<\/div>\n<\/div>\n<\/div>\n[\/vc_column_text][\/vc_column_inner][vc_column_inner width=&#8221;1\/2&#8243; animation=&#8221;animation bottom-to-top&#8221;][vc_column_text css=&#8221;.vc_custom_1730534872791{margin-bottom: 0px !important;}&#8221;]\n<h3 class=\"2xl:text-4xl xl:text-3xl lg:text-2xl md:text-2xl text-3xl leading-relaxed sm:font-normal font-semibold text-black sm:mb-10 mb-6 mt-0 text-pre-wrap\" style=\"text-align: center;\">Research Applications<\/h3>\n<p>\u2022 Disease biomarkers research<br \/>\n\u2022 Pathogenesis and prognosis study on diseases<br \/>\n\u2022 Drug compound identification, toxicity assessment and drug efficacy evaluation<br \/>\n\u2022 Regulation mechanism of tissue development<br \/>\n\u2022 Microbial infection and its pathogenesis<br \/>\n\u2022 Animal special behavior mechanism and food\/medicinal value research<\/p>\n<h4>Service Advantages<\/h4>\n<table width=\"690\">\n<tbody>\n<tr>\n<td width=\"171\">State-of-the-art<br \/>\nLC-MS\/MS systems<\/td>\n<td width=\"169\">Rich large<br \/>\nsample experience<\/td>\n<td width=\"165\">High-precision<br \/>\nidentification results<\/td>\n<td width=\"185\">Strict quality<br \/>\ncontrol system<\/td>\n<\/tr>\n<tr>\n<td>Thermo Q Exactive\u2122 HF-X<\/td>\n<td width=\"169\">High throughput automated<br \/>\nsample preparation<\/td>\n<td width=\"165\">Self-built standard library +<br \/>\nThermo mzcloud (4000+)<\/td>\n<td width=\"185\">Strict protocols governing<br \/>\nthe whole workflow<\/td>\n<\/tr>\n<tr>\n<td width=\"171\">Resolution up to 24,000,<br \/>\nensuring high spectral<br \/>\nquality and accurate results<\/td>\n<td width=\"169\">Real-time monitoring<br \/>\ninstrument detection<br \/>\nprocess<\/td>\n<td width=\"165\">100% identification is<br \/>\nachieved through the<br \/>\nstandards<\/td>\n<td width=\"185\">Double quality control<br \/>\nprcoess of isotopic internal<br \/>\nstandard and QC samples<\/td>\n<\/tr>\n<tr>\n<td><\/td>\n<td><\/td>\n<td width=\"165\">Identification credibility<br \/>\nrating<\/td>\n<td><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p>&nbsp;[\/vc_column_text][\/vc_column_inner][\/vc_row_inner]\t\t<div id=\"et-button-6a9e924a1d0af\" class=\"et_btn_align_left animation left-to-right\">\n\t\t\t<a href=\"http:\/\/www.geneethic.com.tr\/?page_id=2221\" class=\" et_btn button et_btn_sm solid color-  arrow-enabled \"  role=\"button\" title=\"Contact_Geneethic\" ><span>Need a quotation?<\/span><svg xmlns=\"http:\/\/www.w3.org\/2000\/svg\" xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" x=\"0px\" y=\"0px\"\r\n\t width=\"30px\" height=\"18px\" viewBox=\"0 0 30 18\" enable-background=\"new 0 0 30 18\" xml:space=\"preserve\">\r\n<path class=\"handle\" d=\"M20.305,16.212c-0.407,0.409-0.407,1.071,0,1.479s1.068,0.408,1.476,0l7.914-7.952c0.408-0.409,0.408-1.071,0-1.481\r\n\tl-7.914-7.952c-0.407-0.409-1.068-0.409-1.476,0s-0.407,1.071,0,1.48l7.185,7.221L20.305,16.212z\"\/>\r\n<path class=\"bar\" fill-rule=\"evenodd\" clip-rule=\"evenodd\" d=\"M1,8h28.001c0.551,0,1,0.448,1,1c0,0.553-0.449,1-1,1H1c-0.553,0-1-0.447-1-1\r\n\tC0,8.448,0.447,8,1,8z\"\/>\r\n<\/svg>\r\n<\/a>\n\t\t<\/div>\n\t\t\n\t[vc_row_inner et_max_width=&#8221;&#8221; et_column_align=&#8221;align-center&#8221; content_placement=&#8221;middle&#8221;][vc_column_inner offset=&#8221;vc_col-lg-6&#8243;][\/vc_column_inner][\/vc_row_inner][\/vc_column][\/vc_row][vc_row et_column_align=&#8221;align-center&#8221; css=&#8221;.vc_custom_1579113617984{padding-top: 60px !important;padding-bottom: 60px !important;}&#8221;][vc_column width=&#8221;1\/2&#8243; animation=&#8221;animation bottom-to-top&#8221;][vc_tta_accordion active_section=&#8221;1&#8243;][vc_tta_section title=&#8221;Specifications&#8221; tab_id=&#8221;1557543124640-60cb9bb3-2cc8&#8243;][vc_column_text]\n<ul>\n<li>Increase metabolome depth of coverage using both ACQUITY UPLC BEH C18 and Amide column<\/li>\n<li>(+) and (-) ESI detection by a Q\u00a0Exactive HF\/HF-X mass spectrometer<\/li>\n<li>Summary includes all methods and data analysis<\/li>\n<li>Reports provided in Excel or PDF format, RAW files available upon request<\/li>\n<li>Typical 5-7 weeks after sample receipt for raw data delivery<\/li>\n<\/ul>\n[\/vc_column_text][\/vc_tta_section][vc_tta_section title=&#8221;Sample Requirements&#8221; tab_id=&#8221;1557543124710-e0287025-a0eb&#8221;][vc_column_text]\n<table>\n<thead>\n<tr>\n<th class=\"style_table_cell__2wtB2\">SAMPLE TYPE<\/th>\n<th class=\"style_table_cell__2wtB2\">RECOMMENDED SAMPLE AMOUNT<\/th>\n<th class=\"style_table_cell__2wtB2\">MINIMUM SAMPLE AMOUNT<\/th>\n<\/tr>\n<\/thead>\n<tbody>\n<tr>\n<td class=\"style_table_cell__2wtB2\">Serum, plasma<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 300 \u00b5L<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 100 \u00b5L<\/td>\n<\/tr>\n<tr>\n<td class=\"style_table_cell__2wtB2\">Urine<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 300 \u00b5L<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 100 \u00b5L<\/td>\n<\/tr>\n<tr>\n<td class=\"style_table_cell__2wtB2\">Animal and clinical tissues<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 200 mg<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 25 mg<\/td>\n<\/tr>\n<tr>\n<td class=\"style_table_cell__2wtB2\">Feces and intestinal contents<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 200 mg<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 25 mg<\/td>\n<\/tr>\n<tr>\n<td class=\"style_table_cell__2wtB2\">Cell<\/td>\n<td class=\"style_table_cell__2wtB2\">1\u00d710^7<\/td>\n<td class=\"style_table_cell__2wtB2\">5\u00d710^6<\/td>\n<\/tr>\n<tr>\n<td class=\"style_table_cell__2wtB2\">Microorganism<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 200 mg<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 25 mg<\/td>\n<\/tr>\n<tr>\n<td class=\"style_table_cell__2wtB2\">Culture medium, fermentation medium<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 1 mL<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 100 \u00b5L<\/td>\n<\/tr>\n<tr>\n<td class=\"style_table_cell__2wtB2\">Milk<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 1 mL<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 100 \u00b5L<\/td>\n<\/tr>\n<tr>\n<td class=\"style_table_cell__2wtB2\">Other body fluids (amniotic fluid, saliva, hemolymph, cerebrospinal fluid, etc.)<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 300 \u00b5L<\/td>\n<td class=\"style_table_cell__2wtB2\">\u2265 100 \u00b5L<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p>&nbsp;[\/vc_column_text][\/vc_tta_section][vc_tta_section title=&#8221;Data Analysis&#8221; tab_id=&#8221;1684783447897-d707e395-dd7f&#8221;][vc_column_text]\n<ul>\n<li>Data analysis performed with metaX1 and BGI Genomics library<\/li>\n<li>T-test, PCA, PLS-DA,\u00a0OPLS-DA for differential metabolite identification<\/li>\n<li>Cluster analysis<\/li>\n<li>Metabolite pathway annotation<\/li>\n<li>ROC analysis<\/li>\n<li>Metabolite correlation analysi<\/li>\n<\/ul>\n[\/vc_column_text][\/vc_tta_section][\/vc_tta_accordion][vc_column_text animation=&#8221;animation bottom-to-top&#8221;]\n<div class=\"md:px-[13%] px-[5%] pt-40 pb-10 2xl:h-[298px] sm:min-h-min min-h-[15rem] bg-no-repeat bg-cover bg-center bg-gradient\">\n<p class=\"text-white text-pre-wrap 2xl:text-6xl xl:text-5xl lg:text-4xl md:text-3xl text-4xl\" style=\"text-align: center;\"><a href=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2024\/11\/untargeted-medical-metabolomics-service.pdf\" target=\"_blank\" rel=\"noopener\"><strong>Untargeted Metabolomics<\/strong><\/a><\/p>\n<\/div>\n<p style=\"text-align: center;\"><strong><br \/>\n<img loading=\"lazy\" decoding=\"async\" class=\"aligncenter wp-image-4369 size-thumbnail\" src=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280-150x150.webp\" alt=\"\" width=\"150\" height=\"150\" srcset=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280-150x150.webp 150w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280-300x300.webp 300w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280-1024x1024.webp 1024w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280-768x768.webp 768w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280.webp 1280w\" sizes=\"auto, (max-width: 150px) 100vw, 150px\" \/><br \/>\n<\/strong>[\/vc_column_text][\/vc_column][\/vc_row][vc_row et_full_width=&#8221;true&#8221; et_row_padding=&#8221;true&#8221; css=&#8221;.vc_custom_1579113623784{padding-top: 60px !important;background-color: #f6f6f6 !important;}&#8221;][vc_column][vc_row_inner et_column_align=&#8221;align-center&#8221; content_placement=&#8221;middle&#8221;][vc_column_inner animation=&#8221;animation bottom-to-top&#8221; offset=&#8221;vc_col-lg-6&#8243;][vc_column_text css=&#8221;.vc_custom_1693853529047{padding-right: 10% !important;padding-left: 10% !important;}&#8221;]\n<h2 style=\"text-align: center;\">Unique DNBSEQ\u2122 Sequencing Technology<\/h2>\n<p>BGI&#8217;s RNA Sequencing services are typically executed with proprietary DNBSEQ\u2122 sequencing technology platforms, for great sequencing data at some of the lowest costs in the industry. DNBSEQ\u2122 offers advantages in terms of lower amplification error rates and much lower duplication rates. In addition, studies have shown the lower index hopping rate in DNBSEQ\u2122 platforms.[\/vc_column_text][\/vc_column_inner][\/vc_row_inner][vc_row_inner et_max_width=&#8221;&#8221; et_column_align=&#8221;align-center&#8221; content_placement=&#8221;middle&#8221;][vc_column_inner animation=&#8221;animation right-to-left&#8221; offset=&#8221;vc_col-lg-6&#8243;]\t<div id=\"et-image-647\" class=\"et-image     et_image_link\">\n\t\t<div class=\"et-image-inner animation bottom-to-top\">\n\t\t\t\t\t\t\t<div class=\"et-image-thumb \">\n\t\t\t\t\t<img loading=\"lazy\" decoding=\"async\" width=\"1522\" height=\"582\" src=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede.png\" class=\"attachment-full\" alt=\"\" srcset=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede.png 1522w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede-300x115.png 300w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede-1024x392.png 1024w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede-768x294.png 768w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede-150x57.png 150w\" sizes=\"auto, (max-width: 1522px) 100vw, 1522px\" \/>\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t\t\t\t<\/div>\n\t<\/div>\n  [\/vc_column_inner][\/vc_row_inner][\/vc_column][\/vc_row][vc_row][vc_column][\/vc_column][\/vc_row]\n","protected":false},"excerpt":{"rendered":"<p>[vc_row et_full_width=&#8221;true&#8221; et_row_padding=&#8221;true&#8221; css=&#8221;.vc_custom_1579113527778{padding-top: 120px !important;padding-bottom: 60px !important;background-color: #f6f6f6 !important;}&#8221;][vc_column css=&#8221;.vc_custom_1684760689814{background-color: #f6f6f6 !important;}&#8221;][vc_row_inner][vc_column_inner animation=&#8221;animation bottom-to-top&#8221;][vc_column_text css=&#8221;.vc_custom_1730534583870{margin-bottom: 0px !important;}&#8221;] Service Description The metabolome refers to the collection of all small molecule metabolites (&lt; 1500 Da) in cells, tissues, organs or biological organisms, metabolites produced by microorganisms, and all exogenous substances from&hellip;<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-4112","page","type-page","status-publish","hentry"],"aioseo_notices":[],"_links":{"self":[{"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/pages\/4112","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=4112"}],"version-history":[{"count":7,"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/pages\/4112\/revisions"}],"predecessor-version":[{"id":4891,"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/pages\/4112\/revisions\/4891"}],"wp:attachment":[{"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=4112"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}