{"id":4090,"date":"2023-05-25T20:09:09","date_gmt":"2023-05-25T20:09:09","guid":{"rendered":"http:\/\/www.geneethic.com.tr\/?page_id=4090"},"modified":"2024-11-12T11:48:59","modified_gmt":"2024-11-12T11:48:59","slug":"single-cell-rna-seq","status":"publish","type":"page","link":"https:\/\/www.geneethic.com.tr\/?page_id=4090","title":{"rendered":"Isobaric Label"},"content":{"rendered":"[vc_row et_full_width=&#8221;true&#8221; et_row_padding=&#8221;true&#8221; css=&#8221;.vc_custom_1579113527778{padding-top: 120px !important;padding-bottom: 60px !important;background-color: #f6f6f6 !important;}&#8221;][vc_column css=&#8221;.vc_custom_1684760689814{background-color: #f6f6f6 !important;}&#8221;][vc_row_inner][vc_column_inner animation=&#8221;animation bottom-to-top&#8221;]\t<div id=\"et-image-386\" class=\"et-image aligncenter    et_image_link\">\n\t\t<div class=\"et-image-inner animation bottom-to-top\">\n\t\t\t\t\t\t\t<div class=\"et-image-thumb \">\n\t\t\t\t\t<img loading=\"lazy\" decoding=\"async\" width=\"300\" height=\"300\" src=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2024\/11\/m3-300x300.png\" class=\"attachment-medium\" alt=\"\" srcset=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2024\/11\/m3-300x300.png 300w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2024\/11\/m3-150x150.png 150w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2024\/11\/m3.png 500w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/>\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t\t\t\t<\/div>\n\t<\/div>\n  [vc_column_text css=&#8221;.vc_custom_1730468743965{margin-bottom: 0px !important;}&#8221;]\n<h3 class=\"2xl:text-4xl xl:text-3xl lg:text-2xl md:text-2xl text-3xl leading-relaxed sm:font-normal font-semibold text-black sm:mb-10 mb-6 mt-0 text-pre-wrap\">Service Description<\/h3>\n<div class=\"text-base text-blank mb-7 text-pre-wrap !leading-loose\">We have developed innovative solutions for optimizing the process of accurately quantifying proteins in complex biological matrices and other complex mixtures.<\/div>\n<div><\/div>\n<div>\n<h3 class=\"2xl:text-4xl xl:text-3xl lg:text-2xl md:text-2xl text-3xl leading-relaxed sm:font-normal font-semibold text-black sm:mb-10 mb-6 mt-0 text-pre-wrap\">Mass Spectrometry Service Specification<\/h3>\n<div class=\"text-base text-blank mb-7 text-pre-wrap !leading-loose\">Isobaric Label Quantitative Proteomics services are performed using nano-flow liquid chromatography and cutting-edge mass spectrometer (Q Exactive HF\/HF-X).<\/div>\n<div><\/div>\n<div class=\"flex justify-center items-center w-[160px] flex-shrink-0 relative sm:mb-0 mb-10 \"><img decoding=\"async\" class=\"max-w-[120px] alignleft\" src=\"https:\/\/cdn.it.bgi.com\/source\/sample-preparation-services_12.png\" alt=\"\" \/><\/div>\n<div class=\"flex-1\">\n<h4 class=\"text-lg text-[#3ba792] mb-4\">Sample Preparation and Services<\/h4>\n<\/div>\n<\/div>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<div>\n<div class=\"flex-1\">\n<div>\n<div class=\"style_seve_content__QlWY2\">\n<p>The QC of enzymatic hydrolysis and labeling steps are strictly controlled by LC-MS DDA analysis<\/p>\n<p>1h\/fraction; 20 fractions for eukaryotes;10 fractions for prokaryotes<\/p>\n<div class=\"flex justify-center items-center w-[160px] flex-shrink-0 relative sm:mb-0 mb-10 \"><img decoding=\"async\" class=\"max-w-[120px]\" src=\"https:\/\/cdn.it.bgi.com\/source\/sequencing-qulaity-standard_20.png\" alt=\"\" \/><\/div>\n<div class=\"flex justify-center items-center w-[160px] flex-shrink-0 relative sm:mb-0 mb-10 \"><\/div>\n<div class=\"flex-1\">\n<h4 class=\"text-lg text-[#3ba792] mb-4\">Quality Standard<\/h4>\n<div>\n<div class=\"style_seve_content__QlWY2\">\n<p>Summary includes all methods and data analysis<\/p>\n<p>Reports provided in Excel or PDF format, RAW files available upon request<\/p>\n<\/div>\n<\/div>\n<\/div>\n<\/div>\n<\/div>\n<\/div>\n<div class=\"flex justify-center items-center w-[160px] flex-shrink-0 relative sm:mb-0 mb-10 \"><img decoding=\"async\" class=\"max-w-[120px] alignleft\" src=\"https:\/\/cdn.it.bgi.com\/source\/turn-around-time_2.png\" alt=\"\" \/><\/div>\n<div class=\"flex-1\">\n<h4 class=\"text-lg text-[#3ba792] mb-4\">Turn Around Time<\/h4>\n<p>&nbsp;<\/p>\n<div>\n<div class=\"style_seve_content__QlWY2\">\n<p>Typical 4-5 weeks from sample QC acceptance to data report delivery<\/p>\n<\/div>\n<\/div>\n<\/div>\n<\/div>\n[\/vc_column_text][\/vc_column_inner][\/vc_row_inner][\/vc_column][\/vc_row][vc_row et_full_width=&#8221;true&#8221; et_row_padding=&#8221;true&#8221; css=&#8221;.vc_custom_1579113590633{padding-top: 60px !important;background-color: #f6f6f6 !important;}&#8221;][vc_column][vc_row_inner et_column_align=&#8221;align-center&#8221; content_placement=&#8221;middle&#8221;][vc_column_inner width=&#8221;1\/2&#8243; animation=&#8221;animation bottom-to-top&#8221; offset=&#8221;vc_col-lg-6&#8243;][vc_column_text css=&#8221;.vc_custom_1730468514462{margin-bottom: 0px !important;}&#8221;]\n<div class=\"style_section__3nkqm\">\n<div class=\"style_richtext__23EN8 style_section_wrapper__39N5M style_section_richtext__2sE4K \">\n<h3 class=\"2xl:text-4xl xl:text-3xl lg:text-2xl md:text-2xl text-3xl leading-relaxed sm:font-normal font-semibold text-black sm:mb-10 mb-6 mt-0 text-pre-wrap\">Isobaric Label TMT Quantitation Proteomics<\/h3>\n<div class=\"text-base text-blank mb-7 text-pre-wrap !leading-loose\">Isobaric Label services incorporate sample multiplexing to provide deep proteome coverage and highly precise quantitation of small or medium-sized sample sets. Samples are prepared and labeled separately, then all samples are pooled and analyzed by nano-flow LC-MS\/MS1.<\/div>\n<\/div>\n<\/div>\n<div class=\"style_section__3nkqm\">\n<div class=\"style_section_wrapper__39N5M\">\n<div><\/div>\n<\/div>\n<\/div>\n[\/vc_column_text][\/vc_column_inner][vc_column_inner width=&#8221;1\/2&#8243; animation=&#8221;animation bottom-to-top&#8221;][vc_column_text css=&#8221;.vc_custom_1730468595017{margin-bottom: 0px !important;}&#8221;]\n<div class=\"md:px-[13%] px-[5%] mb-14\">\n<h3 class=\"2xl:text-4xl xl:text-3xl lg:text-2xl md:text-2xl text-3xl leading-relaxed sm:font-normal font-semibold text-black sm:mb-10 mb-6 mt-0 text-pre-wrap\" style=\"text-align: center;\">Project Workflow<\/h3>\n<div class=\"text-base text-blank mb-7 text-pre-wrap !leading-loose\" style=\"text-align: center;\">BGI Genomics provides Isobaric Label Quantitative Proteomics service using iTRAQ (Isobaric Tags for Relative and Absolute Quantitation), IBT (Isobaric Tags for Quantitation) and TMT (Tandem Mass Tags for Quantitation) technologies developed by AB SCIEX, BGI and Thermo Scientific, respectively.<\/div>\n<ul>\n<li style=\"text-align: left;\">Protein extraction<\/li>\n<li style=\"text-align: left;\">Protein digestion<\/li>\n<li style=\"text-align: left;\">Isobaric labeling<\/li>\n<li style=\"text-align: left;\">HPLC fractionation<\/li>\n<li style=\"text-align: left;\">LC-MS\/MS (DDA)<\/li>\n<li style=\"text-align: left;\">Data analysis<\/li>\n<\/ul>\n<\/div>\n[\/vc_column_text][\/vc_column_inner][\/vc_row_inner]\t\t<div id=\"et-button-6a9e87b3b7461\" class=\"et_btn_align_left animation left-to-right\">\n\t\t\t<a href=\"http:\/\/www.geneethic.com.tr\/?page_id=2221\" class=\" et_btn button et_btn_sm solid color-  arrow-enabled \"  role=\"button\" title=\"Contact_Geneethic\" ><span>Need a quotation?<\/span><svg xmlns=\"http:\/\/www.w3.org\/2000\/svg\" xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" x=\"0px\" y=\"0px\"\r\n\t width=\"30px\" height=\"18px\" viewBox=\"0 0 30 18\" enable-background=\"new 0 0 30 18\" xml:space=\"preserve\">\r\n<path class=\"handle\" d=\"M20.305,16.212c-0.407,0.409-0.407,1.071,0,1.479s1.068,0.408,1.476,0l7.914-7.952c0.408-0.409,0.408-1.071,0-1.481\r\n\tl-7.914-7.952c-0.407-0.409-1.068-0.409-1.476,0s-0.407,1.071,0,1.48l7.185,7.221L20.305,16.212z\"\/>\r\n<path class=\"bar\" fill-rule=\"evenodd\" clip-rule=\"evenodd\" d=\"M1,8h28.001c0.551,0,1,0.448,1,1c0,0.553-0.449,1-1,1H1c-0.553,0-1-0.447-1-1\r\n\tC0,8.448,0.447,8,1,8z\"\/>\r\n<\/svg>\r\n<\/a>\n\t\t<\/div>\n\t\t\n\t[vc_row_inner et_max_width=&#8221;&#8221; et_column_align=&#8221;align-center&#8221; content_placement=&#8221;middle&#8221;][vc_column_inner offset=&#8221;vc_col-lg-6&#8243;][\/vc_column_inner][\/vc_row_inner][\/vc_column][\/vc_row][vc_row et_column_align=&#8221;align-center&#8221; css=&#8221;.vc_custom_1579113617984{padding-top: 60px !important;padding-bottom: 60px !important;}&#8221;][vc_column width=&#8221;1\/2&#8243; animation=&#8221;animation bottom-to-top&#8221;][vc_tta_accordion active_section=&#8221;1&#8243;][vc_tta_section title=&#8221;Specifications&#8221; tab_id=&#8221;1557543124640-60cb9bb3-2cc8&#8243;][vc_column_text]\n<ul>\n<li style=\"text-align: left;\">The QC of enzymatic hydrolysis and labeling steps are strictly controlled by LC-MS DDA analysis<\/li>\n<li style=\"text-align: left;\">1h\/fraction; 20 fractions for eukaryotes;10 fractions for prokaryotes<\/li>\n<li style=\"text-align: left;\">Summary includes all methods and data analysis<\/li>\n<li style=\"text-align: left;\">Reports provided in Excel or PDF format, RAW files available upon reques<\/li>\n<li style=\"text-align: left;\">Typical 4-5 weeks from sample QC acceptance to data report delivery<\/li>\n<\/ul>\n[\/vc_column_text][\/vc_tta_section][vc_tta_section title=&#8221;Sample Requirements&#8221; tab_id=&#8221;1557543124710-e0287025-a0eb&#8221;][vc_column_text]\n<table>\n<thead>\n<tr>\n<th class=\"style_table_cell__2wtB2\">SAMPLE TYPE<\/th>\n<th class=\"style_table_cell__2wtB2\">AMOUNT AND CONCENTRATION<\/th>\n<th class=\"style_table_cell__2wtB2\">MINIMUM SAMPLE VOLUME<\/th>\n<\/tr>\n<\/thead>\n<tbody>\n<tr>\n<td class=\"style_table_cell__2wtB2\">Protein sample in liquid solution<\/td>\n<td class=\"style_table_cell__2wtB2\">Recommended 1000 \u00b5g: 2 \u00b5g\/\u00b5L<\/td>\n<td class=\"style_table_cell__2wtB2\">250 \u00b5L<\/td>\n<\/tr>\n<tr>\n<td class=\"style_table_cell__2wtB2\">Protein sample in liquid solution<\/td>\n<td class=\"style_table_cell__2wtB2\">Minimum Required 50 \u00b5g: 1 \u00b5g\/\u00b5L<\/td>\n<td class=\"style_table_cell__2wtB2\">50 \u00b5L<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n[\/vc_column_text][\/vc_tta_section][vc_tta_section title=&#8221;Data Analysis&#8221; tab_id=&#8221;1684783447897-d707e395-dd7f&#8221;][vc_column_text]\n<ul>\n<li>Data analysis and validation performed with Mascot<\/li>\n<li>Protein identification and quantification list<\/li>\n<li>Differential proteins data statistics and volcano plot<\/li>\n<li>Principal component analysis (PCA) and cluster analysis<\/li>\n<li>Protein GO\/COG\/KOG\/Pathway annotation<\/li>\n<li>GO\/COG\/KOG enrichment analysis of differential proteins<\/li>\n<li>Protein-protein interaction analysis<\/li>\n<li>Protein subcellular localization analysis<\/li>\n<li>Repeatability analysis<\/li>\n<\/ul>\n[\/vc_column_text][\/vc_tta_section][\/vc_tta_accordion][vc_row_inner][vc_column_inner][vc_column_text animation=&#8221;animation bottom-to-top&#8221;]\n<div class=\"md:px-[13%] px-[5%] pt-40 pb-10 2xl:h-[298px] sm:min-h-min min-h-[15rem] bg-no-repeat bg-cover bg-center bg-gradient\">\n<p class=\"text-white text-pre-wrap 2xl:text-6xl xl:text-5xl lg:text-4xl md:text-3xl text-4xl\" style=\"text-align: center;\"><a href=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2024\/11\/Isobaric-Label-Proteomics.pdf\" target=\"_blank\" rel=\"noopener\"><strong>Isobaric Label<\/strong><\/a><\/p>\n<\/div>\n<p style=\"text-align: center;\"><strong><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-4369 aligncenter\" src=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280-300x300.webp\" alt=\"\" width=\"75\" height=\"75\" srcset=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280-300x300.webp 300w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280-1024x1024.webp 1024w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280-150x150.webp 150w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280-768x768.webp 768w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280.webp 1280w\" sizes=\"auto, (max-width: 75px) 100vw, 75px\" \/><\/strong><\/p>\n[\/vc_column_text][\/vc_column_inner][\/vc_row_inner][\/vc_column][\/vc_row][vc_row et_full_width=&#8221;true&#8221; et_row_padding=&#8221;true&#8221; css=&#8221;.vc_custom_1579113623784{padding-top: 60px !important;background-color: #f6f6f6 !important;}&#8221;][vc_column][vc_row_inner et_column_align=&#8221;align-center&#8221; content_placement=&#8221;middle&#8221;][vc_column_inner animation=&#8221;animation bottom-to-top&#8221; offset=&#8221;vc_col-lg-6&#8243;][vc_column_text css=&#8221;.vc_custom_1699874697862{padding-right: 10% !important;padding-left: 10% !important;}&#8221;]\n<h2 style=\"text-align: center;\">Unique DNBSEQ\u2122 Sequencing Technology<\/h2>\n<p>BGI&#8217;s Single Cell Sequencing services are typically executed with proprietary DNBSEQ\u2122 sequencing technology platforms, for great sequencing data at some of the lowest costs in the industry. DNBSEQ\u2122 can offer advantages in terms of lower amplification error rates and much lower duplication rates for some sequencing applications. In addition, studies have shown the lower index hopping rate in DNBSEQ\u2122 platforms.[\/vc_column_text][\/vc_column_inner][\/vc_row_inner][vc_row_inner et_max_width=&#8221;&#8221; et_column_align=&#8221;align-center&#8221; content_placement=&#8221;middle&#8221;][vc_column_inner animation=&#8221;animation right-to-left&#8221; offset=&#8221;vc_col-lg-6&#8243;]\t<div id=\"et-image-341\" class=\"et-image     et_image_link\">\n\t\t<div class=\"et-image-inner animation bottom-to-top\">\n\t\t\t\t\t\t\t<div class=\"et-image-thumb \">\n\t\t\t\t\t<img loading=\"lazy\" decoding=\"async\" width=\"1522\" height=\"582\" src=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede.png\" class=\"attachment-full\" alt=\"\" srcset=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede.png 1522w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede-300x115.png 300w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede-1024x392.png 1024w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede-768x294.png 768w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede-150x57.png 150w\" sizes=\"auto, (max-width: 1522px) 100vw, 1522px\" \/>\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t\t\t\t<\/div>\n\t<\/div>\n  [\/vc_column_inner][\/vc_row_inner][\/vc_column][\/vc_row][vc_row][vc_column][\/vc_column][\/vc_row]\n","protected":false},"excerpt":{"rendered":"<p>[vc_row et_full_width=&#8221;true&#8221; et_row_padding=&#8221;true&#8221; css=&#8221;.vc_custom_1579113527778{padding-top: 120px !important;padding-bottom: 60px !important;background-color: #f6f6f6 !important;}&#8221;][vc_column css=&#8221;.vc_custom_1684760689814{background-color: #f6f6f6 !important;}&#8221;][vc_row_inner][vc_column_inner animation=&#8221;animation bottom-to-top&#8221;][vc_column_text css=&#8221;.vc_custom_1730468743965{margin-bottom: 0px !important;}&#8221;] Service Description We have developed innovative solutions for optimizing the process of accurately quantifying proteins in complex biological matrices and other complex mixtures. Mass Spectrometry Service Specification Isobaric Label Quantitative Proteomics services&hellip;<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-4090","page","type-page","status-publish","hentry"],"aioseo_notices":[],"_links":{"self":[{"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/pages\/4090","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=4090"}],"version-history":[{"count":18,"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/pages\/4090\/revisions"}],"predecessor-version":[{"id":4881,"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/pages\/4090\/revisions\/4881"}],"wp:attachment":[{"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=4090"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}