{"id":3305,"date":"2020-01-17T18:13:38","date_gmt":"2020-01-17T18:13:38","guid":{"rendered":"https:\/\/goya.everthemes.com\/demo-basic\/?page_id=3305"},"modified":"2024-11-12T11:40:49","modified_gmt":"2024-11-12T11:40:49","slug":"about-2","status":"publish","type":"page","link":"https:\/\/www.geneethic.com.tr\/?page_id=3305","title":{"rendered":"Whole Genome Re-Sequencing"},"content":{"rendered":"[vc_row et_full_width=&#8221;true&#8221; et_row_padding=&#8221;true&#8221; css=&#8221;.vc_custom_1579113527778{padding-top: 120px !important;padding-bottom: 60px !important;background-color: #f6f6f6 !important;}&#8221;][vc_column css=&#8221;.vc_custom_1684760689814{background-color: #f6f6f6 !important;}&#8221;]\t<div id=\"et-image-29\" class=\"et-image aligncenter    et_image_link\">\n\t\t<div class=\"et-image-inner animation bottom-to-top\">\n\t\t\t\t\t\t\t<div class=\"et-image-thumb \">\n\t\t\t\t\t<img loading=\"lazy\" decoding=\"async\" width=\"300\" height=\"300\" src=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2024\/11\/9-300x300.png\" class=\"attachment-medium\" alt=\"\" srcset=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2024\/11\/9-300x300.png 300w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2024\/11\/9-150x150.png 150w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2024\/11\/9.png 500w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/>\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t\t\t\t<\/div>\n\t<\/div>\n  [vc_row_inner][vc_column_inner animation=&#8221;animation bottom-to-top&#8221;][vc_column_text css=&#8221;.vc_custom_1684786505130{margin-bottom: 0px !important;}&#8221;]\n<p style=\"text-align: center;\">BGI\u2019s plant and animal whole genome sequencing, also referred to as whole genome re-sequencing (WGRS) involves sequencing the entire genome of a plant or animal, and comparing the sequence to that of a known reference genome. Re-sequencing of the plant and animal genome will identify genetic variations such as SNPs and InDels, and is often\u00a0applied for the identification of functional genes and markers of important traits to facilitate molecular breeding and to improve agricultural production and conservation.<\/p>\n[\/vc_column_text][\/vc_column_inner][\/vc_row_inner][\/vc_column][\/vc_row][vc_row et_full_width=&#8221;true&#8221; et_row_padding=&#8221;true&#8221; css=&#8221;.vc_custom_1579113590633{padding-top: 60px !important;background-color: #f6f6f6 !important;}&#8221;][vc_column][vc_row_inner et_column_align=&#8221;align-center&#8221; content_placement=&#8221;middle&#8221;][vc_column_inner width=&#8221;1\/2&#8243; animation=&#8221;animation bottom-to-top&#8221; offset=&#8221;vc_col-lg-6&#8243;][vc_column_text css=&#8221;.vc_custom_1684786528071{margin-bottom: 0px !important;}&#8221;]WGS provides a more comprehensive, accurate and efficient tool for plant and animal genomics projects that traditionally have used legacy technology such as genotyping arrays or genotyping-by-sequencing. The WGS approach outperforms these methods by providing an order of magnitude more data, greater statistical power, and enhanced variant discovery capabilities, easier analysis \u2013 all at a lower cost.[\/vc_column_text][\/vc_column_inner][vc_column_inner width=&#8221;1\/2&#8243; animation=&#8221;animation bottom-to-top&#8221;][vc_column_text css=&#8221;.vc_custom_1684786545419{margin-bottom: 0px !important;}&#8221;]Our end-to-end workflow can support you with a broad range of species. We also evaluate and accept custom projects on a case-by-case basis. We can perform deep sequencing for a select number of individuals and build a well assembled reference genome for imputations.[\/vc_column_text][\/vc_column_inner][\/vc_row_inner]\t\t<div id=\"et-button-6a9e91b28d04b\" class=\"et_btn_align_left animation left-to-right\">\n\t\t\t<a href=\"http:\/\/www.geneethic.com.tr\/?page_id=2221\" class=\" et_btn button et_btn_sm solid color-  arrow-enabled \"  role=\"button\" title=\"Contact_Geneethic\" ><span>Need a quotation?<\/span><svg xmlns=\"http:\/\/www.w3.org\/2000\/svg\" xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" x=\"0px\" y=\"0px\"\r\n\t width=\"30px\" height=\"18px\" viewBox=\"0 0 30 18\" enable-background=\"new 0 0 30 18\" xml:space=\"preserve\">\r\n<path class=\"handle\" d=\"M20.305,16.212c-0.407,0.409-0.407,1.071,0,1.479s1.068,0.408,1.476,0l7.914-7.952c0.408-0.409,0.408-1.071,0-1.481\r\n\tl-7.914-7.952c-0.407-0.409-1.068-0.409-1.476,0s-0.407,1.071,0,1.48l7.185,7.221L20.305,16.212z\"\/>\r\n<path class=\"bar\" fill-rule=\"evenodd\" clip-rule=\"evenodd\" d=\"M1,8h28.001c0.551,0,1,0.448,1,1c0,0.553-0.449,1-1,1H1c-0.553,0-1-0.447-1-1\r\n\tC0,8.448,0.447,8,1,8z\"\/>\r\n<\/svg>\r\n<\/a>\n\t\t<\/div>\n\t\t\n\t[vc_row_inner et_max_width=&#8221;&#8221; et_column_align=&#8221;align-center&#8221; content_placement=&#8221;middle&#8221;][vc_column_inner offset=&#8221;vc_col-lg-6&#8243;][\/vc_column_inner][\/vc_row_inner][\/vc_column][\/vc_row][vc_row et_column_align=&#8221;align-center&#8221; css=&#8221;.vc_custom_1579113617984{padding-top: 60px !important;padding-bottom: 60px !important;}&#8221;][vc_column width=&#8221;1\/2&#8243; animation=&#8221;animation bottom-to-top&#8221;][vc_tta_accordion active_section=&#8221;1&#8243;][vc_tta_section title=&#8221;Specifications&#8221; tab_id=&#8221;1557543124640-60cb9bb3-2cc8&#8243;][vc_column_text]\n<ul>\n<li>PCR and PCR-Free library methods both available<\/li>\n<li>100bp and 150bp paired-end sequencing available<\/li>\n<li>Raw data, standard and customized data analysis<\/li>\n<li>Available data storage and bioinformatics applications<\/li>\n<li>Guaranteed \u226585% of bases with a quality score of Q30<\/li>\n<li>Standard sequencing coverage 5 &#8211; 10X for population studies<\/li>\n<li>Standard sequencing coverage 10 &#8211; 30X for individual study<\/li>\n<\/ul>\n[\/vc_column_text][\/vc_tta_section][vc_tta_section title=&#8221;Sample Requirements&#8221; tab_id=&#8221;1557543124710-e0287025-a0eb&#8221;][vc_column_text]<strong>Regular Samples:<\/strong><\/p>\n<p><strong>PCR<\/strong><\/p>\n<p>&#8211; Mass: \u2265200ng (Recommend \u2265400ng)<br \/>\n&#8211; Concentration: \u22658ng\/\u03bcL<\/p>\n<p><strong>PCR-free<\/strong><\/p>\n<p>&#8211; Mass: \u22651\u03bcg (Recommend \u22652\u03bcg)<\/p>\n<p>&#8211; Concentration: \u226512.5ng\/\u03bcL<\/p>\n<p><strong>Low Input Samples:\u00a0<\/strong><\/p>\n<p><strong>PCR<\/strong><\/p>\n<p>&#8211; Mass: \u226550ng<br \/>\n&#8211; Concentration: \u22652.5ng\/\u03bcl[\/vc_column_text][\/vc_tta_section][vc_tta_section title=&#8221;Standart Bioinformatics Analysis&#8221; tab_id=&#8221;1684783447897-d707e395-dd7f&#8221;][vc_column_text]\n<ul>\n<li>Data Filtering<\/li>\n<li>Alignment<\/li>\n<li>SNP\/InDel\/SV\/CNV calling, annotation and statistics<\/li>\n<\/ul>\n[\/vc_column_text][\/vc_tta_section][\/vc_tta_accordion][vc_column_text animation=&#8221;animation bottom-to-top&#8221;]\n<p style=\"text-align: center;\"><strong><a href=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/Plant-and-Animal-Whole-Genome-Re-Sequencing.pdf\">Plant and Animal Whole Genome Re-Sequencing<\/a><\/strong><\/p>\n<p style=\"text-align: center;\"><a href=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/Plant-and-Animal-Whole-Genome-Re-Sequencing.pdf\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter wp-image-4369\" src=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280-300x300.webp\" alt=\"\" width=\"75\" height=\"75\" srcset=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280-300x300.webp 300w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280-1024x1024.webp 1024w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280-150x150.webp 150w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280-768x768.webp 768w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/11\/download-6155763_1280.webp 1280w\" sizes=\"auto, (max-width: 75px) 100vw, 75px\" \/><\/a><\/p>\n[\/vc_column_text][\/vc_column][\/vc_row][vc_row et_full_width=&#8221;true&#8221; et_row_padding=&#8221;true&#8221; css=&#8221;.vc_custom_1579113623784{padding-top: 60px !important;background-color: #f6f6f6 !important;}&#8221;][vc_column][vc_row_inner et_column_align=&#8221;align-center&#8221; content_placement=&#8221;middle&#8221;][vc_column_inner animation=&#8221;animation bottom-to-top&#8221; offset=&#8221;vc_col-lg-6&#8243;][vc_column_text css=&#8221;.vc_custom_1684782487573{padding-right: 10% !important;padding-left: 10% !important;}&#8221;]\n<h2 style=\"text-align: center;\">Unique DNBSEQ\u2122 Sequencing Technology<\/h2>\n<div>\n<div class=\"sm:leading-normal leading-loose text-base text-text-600\"><\/div>\n<\/div>\n<p style=\"text-align: center;\">BGI&#8217;s sequencing services are typically executed with proprietary DNBSEQ\u2122 sequencing technology platforms, for great sequencing data at some of the lowest costs in the industry. DNBSEQ\u2122 offers advantages in terms of lower amplification error rates and much lower duplication rates. In addition, studies have shown the lower index hopping rate in DNBSEQ\u2122 platforms.<\/p>\n[\/vc_column_text][\/vc_column_inner][\/vc_row_inner][vc_row_inner et_max_width=&#8221;&#8221; et_column_align=&#8221;align-center&#8221; content_placement=&#8221;middle&#8221;][vc_column_inner animation=&#8221;animation right-to-left&#8221; offset=&#8221;vc_col-lg-6&#8243;]\t<div id=\"et-image-496\" class=\"et-image     et_image_link\">\n\t\t<div class=\"et-image-inner animation bottom-to-top\">\n\t\t\t\t\t\t\t<div class=\"et-image-thumb \">\n\t\t\t\t\t<img loading=\"lazy\" decoding=\"async\" width=\"1522\" height=\"582\" src=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede.png\" class=\"attachment-full\" alt=\"\" srcset=\"https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede.png 1522w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede-300x115.png 300w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede-1024x392.png 1024w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede-768x294.png 768w, https:\/\/www.geneethic.com.tr\/wp-content\/uploads\/2023\/05\/dedede-150x57.png 150w\" sizes=\"auto, (max-width: 1522px) 100vw, 1522px\" \/>\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t\t\t\t<\/div>\n\t<\/div>\n  [\/vc_column_inner][\/vc_row_inner][\/vc_column][\/vc_row][vc_row][vc_column][\/vc_column][\/vc_row]\n","protected":false},"excerpt":{"rendered":"<p>[vc_row et_full_width=&#8221;true&#8221; et_row_padding=&#8221;true&#8221; css=&#8221;.vc_custom_1579113527778{padding-top: 120px !important;padding-bottom: 60px !important;background-color: #f6f6f6 !important;}&#8221;][vc_column css=&#8221;.vc_custom_1684760689814{background-color: #f6f6f6 !important;}&#8221;][vc_row_inner][vc_column_inner animation=&#8221;animation bottom-to-top&#8221;][vc_column_text css=&#8221;.vc_custom_1684786505130{margin-bottom: 0px !important;}&#8221;] BGI\u2019s plant and animal whole genome sequencing, also referred to as whole genome re-sequencing (WGRS) involves sequencing the entire genome of a plant or animal, and comparing the sequence to that of&hellip;<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-3305","page","type-page","status-publish","hentry"],"aioseo_notices":[],"_links":{"self":[{"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/pages\/3305","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=3305"}],"version-history":[{"count":34,"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/pages\/3305\/revisions"}],"predecessor-version":[{"id":4875,"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=\/wp\/v2\/pages\/3305\/revisions\/4875"}],"wp:attachment":[{"href":"https:\/\/www.geneethic.com.tr\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=3305"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}